Restoring Thyroid Hormone Balance

Nuts and fruit in bowls showing that nutrition can help balance thyroid hormones.
Read Time: 6 Minutes

The thyroid gland plays a major role in the regulation of many body processes, especially those related to metabolic function. Maintaining optimal function of the thyroid and balanced levels of its main hormones, triiodothyronine (T3) and thyroxine (T4), is vital for overall health.

Dysfunction of thyroid hormone performance is quite common and may result from conditions such as thyroiditis and hypothyroidism. In the US, hypothyroidism is estimated to affect approximately 12% of adults, with a potentially higher prevalence in older populations.1 The autoimmune condition known as Hashimoto’s thyroiditis is the most common type of hypothyroidism, which more often occurs in women, and has an estimated global prevalence between 7.5% and 11.4%, depending on geographic region and economic group.2 In this disorder, a dysregulated immune response impairs the production of thyroid hormones. On the flip side from a low-functioning thyroid is hyperthyroidism, which has a global prevalence estimated between 0.2% and 2.5%, with women more likely to develop the condition.3 Graves’ disease is the most common cause of hyperthyroidism.3,4 In this autoimmune disorder, autoantibodies activate the thyroid-stimulating hormone receptor, inducing excessive thyroid hormone secretion.

A low-functioning thyroid is conventionally treated by taking the thyroid hormone medicine levothyroxine,5 while hyperthyroid conditions such as Graves’ disease may be conventionally treated by antithyroid drugs, radioiodine, or potentially surgery.4 How can the functional medicine approach help restore thyroid hormone balance and promote thyroid health? Understanding the factors that may be at the root of an imbalance is an important place to start. In the following video, Patrick Hanaway, MD, IFM educator and senior advisor to IFM’s CEO, discusses functional medicine’s role in addressing low thyroid function and helping the thyroid to heal.

[Video Time: 2:00]Dr. Hanaway is a board certified family physician who teaches on the clinical application of nutritional biochemistry, with an emphasis on digestion, immunology, mitochondrial function, and wellness. He is also the former medical director of the Center for Functional Medicine at the Cleveland Clinic.

Endocrine Disruptors, Stress, and Inflammation

Among the different factors that may negatively affect thyroid health, endocrine disruptors can have a potentially major impact on the function of this gland.6,7 A 2023 systematic review of 237 observational studies investigated the association between endocrine-disrupting chemical (EDC) exposure and risk of endocrine-related malignancies.7 The review found that the most tumorigenic EDC groups were phthalates, heavy metals, particulate matter, and pesticides, and that the thyroid was the endocrine organ that presented the highest cancer risk after EDC exposure.7

A 2021 investigation on EDCs, which are often found in foods, food packaging, water, and personal care products, indicated that EDCs such as bisphenol A (BPA), phthalates, and flame retardant compounds, including polychlorinated biphenyls (PCBs), can interfere with thyroid gland functioning and thyroid hormone transport through multiple mechanisms.8 Specific to BPAs, in vitro and in vivo studies report that antagonism with thyroid receptors, influencing gene expression at the thyroid and pituitary levels, and interruption of thyroid transport proteins are among the mechanisms leading to thyroid dysfunction.9 Observational studies have also noted a higher prevalence of autoimmune thyroid diseases in people living in polluted areas, near petrochemical plants, and in areas contaminated with organochlorine pesticides or PCBs.10

Other factors that may impact thyroid hormone balance include stress as well as chronic inflammation. While the mechanisms have not been fully identified, impaired regulation of oxidative stress and inflammation, for example, characterizes the progression of subclinical hypothyroidism, which increases the risk for cardiovascular diseases, including hypertension.11,12 Specific to thyroid hormone changes due to psychological stress, a 2020 systematic review of 10 observational studies (n=674) examined the association between thyroid function and posttraumatic stress disorder (PTSD).13 The meta-analysis showed higher levels of free T3 in patients with combat-related PTSD compared with controls, with no differences in thyroid-stimulating hormone (TSH), free T4, or total T4 between groups, suggesting that PTSD may contribute to changes in thyroid function.13

Subclinical Hypothyroidism: The Controversy & Testing Challenges

Experts continue to make differing recommendations regarding the treatment of subclinical hypothyroidism14 and whether or not to give exogenous thyroid hormones. With this condition, TSH levels are elevated (5-10 mIU/L), while circulating thyroid hormone levels are normal.14 The upper limit of the TSH range for levothyroxine treatment has been debated,15 as well as the effectiveness of conventional thyroid hormone therapy in mild hypothyroidism.16

Some functional medicine strategies may help with low-functioning thyroid issues by using low-risk diet and lifestyle treatments that may improve thyroid function by addressing the root of the issue. In addition to a comprehensive thyroid evaluation, consideration of an individual patient’s specific disease, lifestyle, comorbidities, and other pertinent factors helps to create a valuable overview for potential treatment direction.

Balancing Thyroid Hormones

Functional medicine recognizes that illness does not occur in isolation, and the IFM Matrix helps practitioners examine the body systems, symptoms, and risk factors associated with a specific condition. The matrix, located within the IFM Toolkit, provides an outline for the practitioner to organize the patient’s clinical imbalances in the following biological systems, called nodes: defense and repair, energy, biotransformation and elimination, transport, communication, structural integrity, and assimilation. Addressing toxicant exposures, systemic inflammation, and chronic stress are all approaches to enhancing thyroid health.

Another resource in the IFM Toolkit, called Factors That Affect Thyroid Function, can help the clinician identify the following:

  • Factors that inhibit proper production of thyroid hormones.
  • Factors that increase conversion of T4 to RT3.
  • Factors that contribute to the proper production of thyroid hormones.
  • Factors that increase conversion of T4 to T3.
  • Factors that improve cellular sensitivity to thyroid hormones.

Nutrients & Gut Health

Personalized interventions that focus on biotransformation, anti-inflammatory diets, and specific nutrients are important considerations for restoring thyroid hormone balance. Adequate intake and availability of micronutrients such as iodine and iron are crucial for thyroid hormone synthesis, while selenium and zinc are needed for the conversion of T4 to T3,17,18 which takes place primarily in the liver but also in other organs such as the intestines as well as intracellularly.19 In addition, botanical supplements such as ashwagandha have been used as complementary treatments to address thyroid dysfunctions. A 2018 pilot study (n=50) compared the efficacy and safety of ashwagandha root extract in subclinical hypothyroid patients to a placebo.20 The treatment group received 600 mg of the root extract per day for eight weeks. Results showed an improved serum TSH and T4 at the end of treatment compared to placebo, with few mild and temporary adverse effects.20

Gut health and a balanced microbial landscape benefit many system processes in the body, and gut dysbiosis and intestinal autoimmune diseases have been reported concurrently with autoimmune thyroid diseases.18,21,22 To further explore the relationship between gut and thyroid health, a 2020 clinical trial (n=60) investigated the effect of synbiotic supplementation (which combines pre and probiotic ingredients) on thyroid function.23 Patients with hypothyroidism on levothyroxine either received 500 mg/day of the synbiotic or a placebo for eight weeks. After treatment, results indicated a beneficial effect, with TSH concentration, levothyroxine dose, and fatigue severity scale scores significantly decreased in the synbiotic group compared to placebo.23


Research continues to reveal the complexity of the thyroid’s hormonal interplay with other biological processes. At IFM’s Hormone Advanced Practice Module (APM), learn more about how lifestyle interventions can positively impact the intricate web of the endocrine system, gather tools such as IFM’s comprehensive Thyroid Support Decision Tree, and hear functional medicine experts discuss the latest thyroid-related research.


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  2. Hu X, Chen Y, Shen Y, Tian R, Sheng Y, Que H. Global prevalence and epidemiological trends of Hashimoto’s thyroiditis in adults: a systematic review and meta-analysis. Front Public Health. 2022;10:1020709. doi:3389/fpubh.2022.1020709
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